Bioinformatics Core Facility Swiss Institute of Bioinformatics Quartier Sorge - Batiment Genopode, CH-1015 Lausanne, Switzerland
			Eva Budinska +41 (0) 788 750 630 +41 (0) 21 692 40 97 Eva.Budinska@isb-sib.ch

HOME EDUCATION RESEARCH PUBLICATIONS E-learning material: Analysis of Genomic and Proteomic Data CV

2004-2008 (December) PhD. candidate in Oncology at Faculty of Medicine, Masaryk University (MU) , Brno, Czech Republic Dissertation thesis topic: Biomathematical modelling of tumour genome profiling data. (in English) In my thesis I focused my research onto development of methods for analysis of data from arrayCGH experiments and developed MSMAD: a median smoothing based method for analysis of noisy arrayCGH data. (The article was currently submitted to Bioinformatics. ) In the second year of my doctoral studies, I absolved an intership in Statistics and Genome team at Applied Mathematics and Informatics Department of INA-PG in Paris, France, where I have participated on the development and implementation of a method for joint multipatient segmentation of arrayCGH data, under the supervision of Stephane Robin. This cooperation resulted in article Joint segmentation of multivariate Gaussian processes using mixed linear models 1998 - 2004 M.Sc. in Mathematical biologyat Faculty of Natural Science, Masaryk University (MU) , Brno, Czech Republic Diploma thesis topic: Statistical approach to molecular cytogenetic analysis of genetic pathological states. (in Slovak) The thesis was divised into two main parts: Assesment of cut-off level percentage of Ph chromosome positive cells detected by ES-FISH in patients with expected CML, in a molecular cytogenetic laboratory. Prediction modelling of microdeletion syndrome 22q11 according to phenotype manifestation using a logistic regression.